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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791944.1_cds_XP_016509492.1_2166
CDS Infomation

[gene=LOC107826958] [db_xref=GeneID:107826958] [protein=importin-5-like] [partial=3'] [protein_id=XP_016509492.1] [location=join(9214..9292,14809..15425,15505..15708,16473..16577,16683..16748,16837..17001,17506..17577,17658..17788,18262..18337,18712..18843,18941..19010,19114..19238,19349..>19405)] [gbkey=CDS]
Sequence

ATGAAGAAAAGAAAGTTGGATAAGAAAAATCCAGCAGATGATAAGGGTGAACAGATTGAG
AAAAATAAGAGGGAGCAAGTCCTGACCACAGCGTTCAGATTCATTCGGTGCCTACCGAGT
TTAAATGAAAGGCAGCGGTTTCAGAATCTATTGCCAGCTACGCTAAGGATGCTGACTGAT
GCAATGAGCAACAGTGAAAATGTTTTAGCCCAGGACGTGCTGTCATTTTTTACTAAATTG
GCGAAGAATGAGCCTAGGTTCTTAAGGACACAATTAGCAGATGTGGTGAATACTATGTTT
GAGATAGCAGAGGCTAAGAGTTTGAAAGAACCGACAAGGCACATGGCAGTTAGCTTTGTG
TTAAAATTGCTCGAAGGGAAGGAGAAGGCCCTTGGCATGCTACAAAAATTGCCATGGTTT
ACTAACACTTTCCTTGAAATTCTATTTAATTTGTTACTGGATATTAAGGATGAACCTCAT
TGGCATACTGCGGAGACCAACAATGAGAATGCAGGGGTAACGAAAGGATACTATTTTGGT
TGCAGTGGTTTGGAACAGTTGTCTAAAGCATTAGGTGACAAAACTATTGCTCCTGTTGCC
ATAGAGCAGCTGAGTGCTTACTTGGTTGCTCCTGAGTGGGAGAAACGCCACGCAGCTCTC
ATTGCACTTTTTTATATTGTTGAAGGAAGCTCAAAGGTGATGATCAACTACTTGGAGCAA
CTAGTGAATATGGTTCTGCAACCTTTCCAAGATCCTCATCCTCGAGTCAGATGGGCTGCT
ATTAGATCAATTGCCTGGTGGTCAATTGAATTCTTTCCAGATTTGCAAGAAAAATATCAT
AATCATGTATTGCCTGCATTAGCTTCAGCTATGGATGATTTTCAAAATCCTCGAGTTCAG
GCACATGCATCAGTAGCTGTCATGAAATTCTGTATATCTAAAAAGCCTGAAACTTTGGTA
CCCTACTTAGATGGGATACTCAACAAACTGCTTGTACTTCTGCAGACTGACAATCAAATG
GTTCAGGAAGCAGCATTAGATGCATTGGGTTATATAGCTGATTTTTCTAAAGAGCACTTC
CAAAAGTACTATGATTTTGTAACGCCGCATTTGAAAGCTCTGCTGGTAAATGCAAATGAT
AAGTCTAATCACATTATTCGAAGCAAAGCCATGGAATGCATAAGCTTTGTTGGGATTGCT
GTTGGCAAAGAGAAATTCAGAGATGACTTGCATCAGGCTATGGAAGTGCTCAAGTCATTA
CAAGAATCACGGGTGAAAGAGCTTGATACTATTGTTTACATTCTACAGGCATGGTCCAGA
ATTTGCCAGTGCGTGGGGAAGGATTTTCTTCCTTACATGAGTACGGTCATGCCATTTTTG
GTTGAATGTGCTCAACTTGAGCCCGATAAGACCGTATTCACTAATGGACCATATAGCAGC
TCAAAGTGGCATAACATGTTCTCTAACTTTGGCAAGAAAATGATCGACCTATATTGCTTT
GATATCCGCCAGAAGAAAGTCAAGCTTTGGGATGAATTAATATGCATCAAAGGAAGTGAC
CTCCTATATGCGAAATTTGTGGCCTGTAGTAACCTTGCTTTGTATGCTCTGAGCATGAAA
GAAGACTTCTACCCATGGATACCCCAGGCTGCTTCAATTTTTGCTCCCCTTCTGAAATTC
TATATGCACAATAACATCAGGAATAATGCTGCTCGTGGATTATACGTCCTGTTGCGTTCA
GCTACACTGGCGGTAGAGAATGGGGCTGCTCAAGGTGGAGAGTCATACTTCAAGCAGTTG
TCTGGCAATATAATATTGGCTCTGGGAGACGCTTTATATTCGGAGCCTGAGACAAAATTA
TGTGCATATATATTGCGTTCATTGGGTAACTGCCTACAG

Peptide Sequence

PEP ID

XP_016509492.1
PEP Infomation

PREDICTED: importin-5-like, partial [Nicotiana tabacum]
Sequence

MKKRKLDKKNPADDKGEQIEKNKREQVLTTAFRFIRCLPSLNERQRFQNLLPATLRMLTD
AMSNSENVLAQDVLSFFTKLAKNEPRFLRTQLADVVNTMFEIAEAKSLKEPTRHMAVSFV
LKLLEGKEKALGMLQKLPWFTNTFLEILFNLLLDIKDEPHWHTAETNNENAGVTKGYYFG
CSGLEQLSKALGDKTIAPVAIEQLSAYLVAPEWEKRHAALIALFYIVEGSSKVMINYLEQ
LVNMVLQPFQDPHPRVRWAAIRSIAWWSIEFFPDLQEKYHNHVLPALASAMDDFQNPRVQ
AHASVAVMKFCISKKPETLVPYLDGILNKLLVLLQTDNQMVQEAALDALGYIADFSKEHF
QKYYDFVTPHLKALLVNANDKSNHIIRSKAMECISFVGIAVGKEKFRDDLHQAMEVLKSL
QESRVKELDTIVYILQAWSRICQCVGKDFLPYMSTVMPFLVECAQLEPDKTVFTNGPYSS
SKWHNMFSNFGKKMIDLYCFDIRQKKVKLWDELICIKGSDLLYAKFVACSNLALYALSMK
EDFYPWIPQAASIFAPLLKFYMHNNIRNNAARGLYVLLRSATLAVENGAAQGGESYFKQL
SGNIILALGDALYSEPETKLCAYILRSLGNCLQ

Transcript Sequence

Gene sequence data has not been registered.